BIOBASIX
A unique ONLINE BIOLOGY PORTAL for Secondary school students in India!!
Aug 19, 2010
SCIENCE NEWS - Decreasing HIV infection risk through Breast feeding
Two research teams are now investigating a germ-warfare strategy to treat such vulnerable infants. They would supplement breast milk with HIV-quashing bacteria. These beneficial microbes can’t guarantee a child won’t become infected, but they could greatly diminish the chance this will happen, says HIV specialist Ruth Connor of Dartmouth Medical School in Lebanon, N.H. They reported isolating certain lactic acid bacteria from the breast milk of healthy women that substantially inhibit the growth and infectivity of human immunodeficiency virus type 1, or HIV-1. b. In test-tube studies, all 38 strains of bacteria tested — representing 15 different species — showed some inhibition of HIV.
Lin Tao, a microbiologist at the University of Illinois at Chicago’s Department of Oral Biology, has spent the better part of a decade working on a probiotic treatment for infants whose mothers are infected with HIV. The strain his group is studying does far better than others but still falls short of wiping out all HIV that might enter an infant’s gut. That’s why his group’s new strategy is to include a second probiotic, one that can bolster an infant’s immune system. The first bacterium reduces the number of virus particles that survive in the infant gut. The second bug, by enhancing immunity, increases the threshold number of viruses needed to cause infection, Tao says.
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SCIENCE NEWS - A new vaccine-delivery system with 100 tiny dissolvable needles in a Band-Aid–like patch
Jul 4, 2010
SCIENCE NEWS - Pseudogenes are no more vestigial.
SCIENCE NEWS- How the leopard got its spots and the zebra its stripes!!!
May 7, 2010
SCIENCE NEWS - Antibiotic laden wound dressings
Scientists from the University of Bath, England have set out to build a better dressing by peppering it with tiny capsule-like vesicles that look to bacteria exactly like cells prime for infection. But when the bacteria do attack, they release an antibacterial agent that kills them and any of their kind that happen to be nearby.
The researchers tested their strategy by inoculating pieces of fabric with two harmful bacteria — a species of Staphylococcus and a member of the Pseudomonas group, as well as a harmless type of E. coli. In the study, the harmful bacteria were killed presumably because they released toxins and other chemicals which break the vesicle membrane releasing the antibiotic which kills the bacteria while the harmless group did not cause vesicle lysis and hence survived.
For now, the team is trying to make vesicles that last longer than the current span of minutes to hours.
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Apr 14, 2010
SCIENCE NEWS - Dark roasted coffees may produce a compound that reduces acid production
To explore the science behind these gentler brews, researchers used water and three other solvents to extract compounds from regular commercial coffee blends. Each solvent extracted a different profile of compounds, including caffeine and N-methylpyridinium (NMP), a ringed compound that doesn’t appear in green coffee beans but is created in the roasting process. Stomach cells exposed to each suite of compounds upped their acid secretion, except for the cells exposed to the extract containing NMP. The team then compared the chemical profiles of a dark roasted and light roasted brew made with regular roasted and steam-treated beans. Both versions of the dark roasted coffee had more than 30 milligrams per liter of NMP, as compared with the lighter roast, which had 22 mg/l. The light roast that was subjected to steam treatment, a technique thought to weaken coffee’s stomach-provoking powers, had a mere 5 mg/l of NMP.
How NMP acts on the gastric system isn’t well understood. Acid secretion didn’t change noticeably in stomach cells treated with NMP alone. The friendlier darker brews also had less caffeine than their lighter-brewed counterparts. This lower caffeine may also contribute to the darker roasts’ antacid powers.
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SCIENCE NEWS - Oils from human skin fight off Ozone but at a cost!!!
Apr 11, 2010
SCIENCE NEWS - Multicelled animals may live oxygen-free
Also, the loriciferans aren’t even a millimeter long and have limited mobility, so it’s unlikely that they’d move through the 50 meters of oxygen-free water above them. Thus, the researchers argue, it’s most likely the basin is their full-time home. Their cells don’t appear to have mitochondria, which use oxygen to generate energy. Instead, images of loriciferan tissue reveal what look like hydrogenosomes, organelles that power some anaerobic single-celled creatures.
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Apr 6, 2010
SCIENCE NEWS - Insulin-producing cells can renegerate
Even if human pancreases can perform the alpha to beta conversion, the immune system in type 1 diabetics would kill the newly transformed cells unless researchers could figure out how to stop the immune system attack and reduce inflammation in the pancreas that accompanies diabetes. Efforts to control the immune system could give the pancreases of type 1 diabetic patients a chance to recover at least some function. “The life of diabetics would change even if the pancreas is only able to produce 1 or 2 percent of normal insulin levels,” say researchers.
The team is now trying to determine if older mice retain the regenerative capacity seen in the young mice used in the study and which signal tells alpha cells to begin transforming into beta cells.
To read the whole story, please CLICK ON THE TITLE ABOVE.BIOBASICS Question of the Week?
BIOBASICS Solution: The term 'Legume' is derived from the Latin word legumen (with the same meaning as the English term), which is in turn believed to come from the verb legere "to gather." A legume in botanical writing is a plant in the family Fabaceae (or Leguminosae), or a fruit of these specific plants.A common name for this type of fruit is a pod, although "pod" is also applied to a few other fruit types, such as vanilla. A pulse is an annual leguminous crop yielding from one to twelve grains or seeds of variable size, shape, and color within a pod. Pulses are used for food and animal feed. The term "pulse", as used by the Food and Agricultural Organization (FAO), is reserved for crops harvested solely for the dry grain. This excludes green beans and green peas, which are considered vegetable crops. Also excluded are crops that are mainly grown for oil extraction (oilseeds like soybeans and peanuts), and crops which are used exclusively for sowing (clovers, alfalfa).
Mar 29, 2010
QUESTION OFTHE WEEK?
Why do the nitrogen fixing bacteria form nodules only on the roots of leguminous plants?
BIOBASICS Solution: The roots of leguminous plants like Pea secrete compounds called Flavanoids which attract nitrogen fixing bacteria and activate the genes which cause nodule formation in the roots.
Mar 27, 2010
SCIENCE NEWS - Acne drug minocycline inhibits HIV activation
SCIENCE NEWS - The first known amphibious insects!!

Young of each species can thrive both underwater in rushing streams and exposed to air on rocks poking out of the water. Hyposmocoma moths live only in the Hawaiian islands, and most species in the genus spend their caterpillarhood exclusively on land before flitting away as full-grown moths. Yet genetic analyses show that within the genus, landlubber lineages have independently evolved amphibious caterpillars. A wood boring caterpillar of this genus is shown below.
In lab studies, the researchers found that these caterpillars don’t have gills or a natural scuba mechanism of trapping air bubbles. Instead, they appear to get oxygen directly from water. To survive submerged, the caterpillars need fast-flowing waters where they shelter on the downstream sides of rocks and spin tethers to keep from washing away. Caterpillars in this genus crawl around partly covered by silk-spun cases of a variety of shapes and sizes that they add to as they grow. Species in the newly described amphibious lineages, still awaiting formal scientific names, make cases called cones, bugles and burritos. Researchers have also found cases in the shapes of cigars, candy wrappers, oyster shells, dog bones and bowties. “We’re running out of names to describe them,” Rubinoff says.Besides introducing some remarkable caterpillars, the work emphasizes the importance of islands in the study of evolution. Isolated mixes of the relatively few kinds of creatures that arrive on islands can come up with novelties unknown elsewhere. “Islands are clearly these crucibles of evolution,” Rubinoff says.
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Mar 24, 2010
QUESTION OF THE WEEK?
What is DANDRUFF & how is it formed?
A fungus is at least partly to blame for the presence of Dandruff on your scalp. Dandruff is related to the presence of certain species of Malassezia—ubiquitous, hard-to-eradicate fungi that live on humans and other mammals.
Malassezia live on your scalp--whether or not you have dandruff—and dine on the oil that your scalp excretes, the researchers say. The fungi break down the oil, called sebum, into free fatty acids, which can irritate the scalp. Irritation prompts the scalp to try to repair itself through extra cell production, which leads to dandruff. The repair also stimulates more sebum secretion, which means more fungi food.
Researchers don't know why only some people get dandruff. Everybody has got Malassezia and everybody has got sebum... but for some reason some people get dandruff and other people don't.
The M. globosa genome has revealed a few interesting facts. First, the fungus lacks the gene that produces lipids. M. globosa can't make fats itself which explains why it is dependent on our sebum.
Another key finding--with implications for the fight against dandruff--is what the fungus uses to break down the sebum. The researchers found that M. globosa secretes several types of proteins—lipases and proteases—that can break up sebum into something the fungus can digest. Inhibition of these lipases would probably be a good thing for starving out the bug. Inhibition of proteases would be a good way to kill the bug.
SCIENCE NEWS - Unique Bacteria on hand provide another form of fingerprint
Their tests, reported online the week of March 15 in the Proceedings of the National Academy of Sciences, raise the possibility that hand bacteria could potentially serve as a new type of fingerprint. Noah Fierer and his colleagues wondered if bacteria could be used in forensic tests when fingerprints fail, such as when the prints are smudged or evidence consists of fabric or other soft surfaces that don’t lend themselves to fingerprinting. After all, says Fierer, “you only need to smudge a fingerprint, but you can’t sterilize a surface just by wiping it off.”
Fierer and his colleagues swabbed the hands of three people and took samples of bacteria from keyboards used exclusively by each of the three. The researchers then created DNA profiles of bacterial populations from the hands and keyboards. The bacteria on an individual’s keyboard closely matched bacteria on their hands, the team found. And the bacterial DNA remained useful for at least two weeks after swabbing. Fierer agrees that much more testing is needed to determine whether bacterial fingerprinting will be a useful forensic tool. The researchers are now trying to determine how many times people must touch objects to leave their bacterial signatures behind and whether bacterial fingerprints can be lifted from cloth or other soft surfaces.
QUESTION OF THE WEEK
a. Akinetes
Mar 21, 2010
SCIENCE NEWS - Some body parts like APPENDIX seem pointless but in fact have purpose

“It’s a dead-end sack,” says William Parker, an immunologist at Duke University in Durham, N.C. “It doesn’t go anywhere.”Parker didn’t start out intending to study the appendix. His specialty is the immune system — a collection of organs, cells and molecules that our bodies use to stay healthy. But his research led him to the appendix anyway.
Parker knew that the human body is full of tiny organisms called bacteria, which can overwhelm the immune system, cause infections and make a person sick. He also knew that some bacteria are good for human health. Among other benefits, these “good” bacteria help people digest food and fight off “bad” bacteria that cause disease.The immune system doesn’t just benefit from good bacteria, though. In the 1990s, Parker and colleagues began to figure out that the immune system also helps good bacteria flourish. These bacteria appear in thin layers called biofilms, which grow on the side of the gut near and inside the appendix. These biofilms, the researchers learned, provide a barrier that keep out bad bacteria. “Once we figured that out, it should have been obvious to us what the appendix did,” says Parker, whose team also found that the appendix has a particularly robust biofilm. “It’s in the perfect spot to harbor bacteria — out of the flow and with a thin, narrow opening. And there’s a large amount of immune tissue associated with it.”
After stumbling on a possible link between the immune system and the appendix, though, the scientists still had some clues to compile before being sure of the organ’s purpose.
Hangout for good bacteria
In 2007, Parker’s team put together all the evidence they had gathered and came up with a conclusion: The appendix serves as a “safe house,” Parker says, a storage bin for good bacteria. If bad bacteria attack, good bacteria emerge from the appendix and come to the rescue.
Having a safe space for good bacteria should be especially useful in parts of the world that are poor and undeveloped — places where people are starving, medicine is hard to come by, clean water is scarce and diarrhea can kill. In those places, Parker says, the appendix probably helps keep people alive, especially young children.
In fact, people in the developing world rarely get infected appendixes, like Smith’s. Most cases of appendicitis, in fact, occur in the United States and other developed countries, where water is purified, hospitals are sterilized and medical care is easier to get.
Those trends suggest that the appendix evolved in our ancestors to maintain health in a bacteria-filled world. Today, places such as the United States might be too sterile for the appendix. When the organ has nothing do, the immune system can turn on itself, sending people to the emergency room, Parker says. Other problems, such as allergies and immune diseases, might have similar roots.
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SCIENCE NEWS - The superheavy COPERNICUM takes its place in the Periodic Table
Everything on Earth that scientists can see, measure or study is made of atoms — and atoms are named by what type of element they are. You probably know the name of many elements, such as oxygen, gold or hydrogen. Others, such as cadmium or xenon, may sound strange and exotic. In any case, elements are everywhere: You, your shoes, your desk, cars, water, air — all made of elements.
Now, there’s a new kid on the block: Elements, meet copernicum.
This element was officially named on February 19, but the element itself isn’t new. German scientists made and observed it in 1996. But in the 14 years since then, other scientists have been working to study and validate the original findings. A scientific breakthrough is “validated” when other scientists can perform the same experiment and get the same results. Validation is an important part of the scientific process because it demonstrates that a scientific discovery was not a mistake.
All that hard work finally paid off when the element finally received its name, copernicum, from the International Union of Pure and Applied Chemistry (the organization in charge of making sure chemists all over the world use the same words to mean the same things.) Copernicum is named in honor of Nicolaus Copernicus, a 16th century Polish scholar who proposed that Earth orbits the sun (rather than that everything orbits Earth) and that Earth turns on its own axis. These ideas may seem obvious now, but in 16th century Europe, they were revolutionary.
Scientists organize all the elements on a chart called the Periodic Table. Each element gets a symbol and its own number, and copernicum gets the symbol Cn and the number 112. This number means that inside every atom of copernicum are 112 protons. Protons are particles inside the nucleus, or core, of every atom. The lightest element, hydrogen, has only one proton inside each atom.
Its 112 protons make copernicum the heaviest known element with a name. It was first observed by Sigurd Hofmann, a scientist at the Center for Heavy Ion Research, or GSI, in Darmstadt, Germany. Hofmann and his team created copernicum in the laboratory when they blasted atoms of lead (each with 82 protons) with zinc isotopes, kinds of zinc atoms that each had 30 protons.
SCIENCE NEWS - Taste is not just for the tongue
Scientists are discovering that TASTE is a whole-body sensation. There are taste cells in the stomach, intestine and, evidence suggests, the pancreas, colon and esophagus. These sensory cells are part of an ancient battalion tasked with guiding food choices since long before nutrition labels, Rachael Ray or even agriculture existed. While taste cells in the mouth make snap judgments about what should be let inside, new work suggests that gut taste cells serve as specialized ground forces, charged with preparing the digestive system for the aftermath of the tongue’s decisions.
Stimulating these gut cells triggers a complex series of events that can dial down, or amp up, the digestion and absorption of the body’s fuel. When hit by bitter — potentially toxic — substances, gut taste cells sound an alarm that may lead to slower absorption or spur vomiting. And when the gut’s taste sensors encounter something sweet, they send a “prepare for fuel” missive that results in cranked-up insulin levels in the blood.
Though scientists don’t fully understand what follows, studies hint at a tantalizing, if convoluted, connection between gut taste cell activity and metabolism. Figuring out such connections may one day lead to new therapies for treating type 2 diabetes, obesity and other disorders. And the sweet-focused research could help explain recent counter-intuitive findings that link such problems with drinking diet soda.
Diet drinks are often enjoyed without food, which means the gut may be preparing for fuel that never arrives.So beware those little white lies. Thousands of years of evolution have yielded a finely tuned digestive machine, one that recognizes incoming energy and knows how to make the most of it. These intricate chains of events evolved during a time when that sweet zing reliably indicated food rich in valuable calories. And for thousands of years, the gut reacted appropriately.
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SCIENCE NEWS - New dinosaur species found in China
The fossil was one of the world's most well-preserved specimen of small predator dinosaurs that lived about 80 million years ago during the late Cretaceous period, said Xu, a research fellow with the Chinese Academy of Sciences. About 2.5-metre long and weighing 25 kg, the dinosaur would have been a fast and agile predator and, like other dromaeosaurids, possessed large 'killing claws'.
The new dinosaur was found in the rocks of the Inner Mongolia Autonomous Region by an international team which consisted of members from China, the US and Britain, Xinhua reported.
The region is known for the huge presence of dinosaur fossils buried in aeolian rocks formed by sandstorm, which the experts believe killed the dinosaurs, resulting in comparatively intact preservation.
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